Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942829.1_cds_XP_016486179.1_77042
CDS Infomation

[gene=LOC107806526] [db_xref=GeneID:107806526] [protein=protein trichome birefringence-like] [protein_id=XP_016486179.1] [location=complement(join(69664..70012,70305..70463,70597..70790,71414..71606,72377..73107))] [gbkey=CDS]
Sequence

ATGGCAGATTCACCACCATCATTACCAACAACAAGAAAAATTCTATTTCCACCACCACCA
TTAAAGATAAGGGTAAATAGCCCTTCAATGTCAGAGTTGAAGAAAAGTCTATTTTCACCT
AATTCATTGAGAACTCCAACAATTAGGACACCAACATCCAAGTCTCAAAAATCCATGTTG
TTGGCTTATGTTTTCACTTTCTGTTTTGTTACATGTGCTATCTTTTTTGTCTTCAATAAT
CCTTCTATCAATCATTCTTTCAAGAAAGTTCTGAATAAGAGATCACAGTTCTCCACCTTT
TTCTCTCACTATTTTTCTTCAAATAATCACAACTCTACTGTTTATTCTCTCCCATTTAAC
AGGAAAACAAATGGGGTTTTTGGGAAACTGAATGATTCTAATTCTCTTTCTGATCAACAT
GGTTTTTCAATATCGCCTAGCCAAATGAATGACTCTGAAAATGGAGAGGAAGAGAAACAA
AAGGTGAATTTCTCATCATTTTCTGTGAGAAATGAAACATCAACTGAAAATCAAAAGAAT
GAGCCTTGGTGGGAAGTGATGAGCCATTGTGATGTTTTTGATGGGGAGTGGGTGAAAGAT
GATGCTAACCCTTTGTATGAACCTGGTTCTTGTCCTTTTATTGATGAGCCATTTGATTGT
TATAAAAATGGAAGGCCTGATAATGGGTATGAGAAATTTAGATGGCAGCCTAAGCACTGT
AACATTCCAAGGTTGAATGCCAAAGAAATGTTGGAACTTTTGAGAGGAAAGCGATTAGTC
TATGTGGGTGACTCTCTGAACAGGAATATGTGGGAATCAATGGTTTGTCTCCTCAGAAGT
TCTGTTGAAGAAAAGAGCAGAGTTTTTGAGGTATCTGGAAGAGAAGATTTCAAGAAAGAG
GGTGCTTATTCTTTTATATTCGCGGACTATAATTGTTCAGTGGAGTTTGTCCGTTCTACT
TTTCTGGTTCAAGAATGGGAAATGCCAGATGGAAATGGATCAACTAAAGAAACACTCAGA
TTAGATCTGGTAGAAAGGTCATGTGACAAATACAAAGGAGCTGATATCCTTGTCTTTAAC
ACAGGGCATTGGTGGACTCACGAGAAAACATCCGAAGGGAAGGGTTACTATCAAGAAGGT
AGTCACGTTTATGGTGAACTAAACGTTGTTGAGGCGTTTCGCAAGGCAATGACAACATGG
GCAAGATGGATTGAGACCAATGTGGATCCTCTGAAGACTGACGTTTTCTTTAGAGGTTAT
TCAGTCTCTCATTTCAGTGGAGGTGAGTGGTATGCTGGTGGAAAATGTGATAGTGATACA
GAGCCACTTCAGGATGAGAAAGATTTGTCACCTTCTCTGTATCCTCCAATAATGGGAATG
TTAGAGGATGTGATAAGGTGGATGAAAACACCAGTCTACTATTTGAATGTTACCATAATG
TCAGATTTCCGCAAGGATGGACATCCATCGATATACAGGAAGCCAAACATGACAGATGAA
GAGAGGAGGACGACGATTAGGTACCAAGATTGCAGCCATTGGTGCCTTCCTGGTGTACCG
GACACTTGGAATGAGCTACTATATGCTCAATTATTGATGAAACATTATCAGAAACAACAG
CAGTAG

Peptide Sequence

PEP ID

XP_016486179.1
PEP Infomation

PREDICTED: protein trichome birefringence-like [Nicotiana tabacum]
Sequence

MADSPPSLPTTRKILFPPPPLKIRVNSPSMSELKKSLFSPNSLRTPTIRTPTSKSQKSML
LAYVFTFCFVTCAIFFVFNNPSINHSFKKVLNKRSQFSTFFSHYFSSNNHNSTVYSLPFN
RKTNGVFGKLNDSNSLSDQHGFSISPSQMNDSENGEEEKQKVNFSSFSVRNETSTENQKN
EPWWEVMSHCDVFDGEWVKDDANPLYEPGSCPFIDEPFDCYKNGRPDNGYEKFRWQPKHC
NIPRLNAKEMLELLRGKRLVYVGDSLNRNMWESMVCLLRSSVEEKSRVFEVSGREDFKKE
GAYSFIFADYNCSVEFVRSTFLVQEWEMPDGNGSTKETLRLDLVERSCDKYKGADILVFN
TGHWWTHEKTSEGKGYYQEGSHVYGELNVVEAFRKAMTTWARWIETNVDPLKTDVFFRGY
SVSHFSGGEWYAGGKCDSDTEPLQDEKDLSPSLYPPIMGMLEDVIRWMKTPVYYLNVTIM
SDFRKDGHPSIYRKPNMTDEERRTTIRYQDCSHWCLPGVPDTWNELLYAQLLMKHYQKQQ
Q

Transcript Sequence

Gene sequence data has not been registered.